BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F07SP1|AL430735
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1572 1827 0.0
>3x_Contig1572
Length = 12810
Score = 1827 bits (919), Expect = 0.0
Identities = 936/943 (99%), Gaps = 1/943 (0%)
Strand = Plus / Plus
Query: 1 gatctgaataggtaaatagttaaagaaatcgatgcgaagagtaatgattaacgcgtatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 gatctgaataggtaaatagttaaagaaatcgatgcgaagagtaatgattaacgcgtatgg 1225
Query: 61 tgagtggtagaagtctgtaacatgccattattcttgcataaagaatgtggaaactccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 tgagtggtagaagtctgtaacatgccattattcttgcataaagaatgtggaaactccata 1285
Query: 121 ccacacactacttactgattccgtagtcaggtcagaacaaatgggttcctcgtcaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 ccacacactacttactgattccgtagtcaggtcagaacaaatgggttcctcgtcaagata 1345
Query: 181 tttatgtattttctacgtatctcgaaaataatttcgggcttcataaagaaaaaatggcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 tttatgtattttctacgtatctcgaaaataatttcgggcttcataaagaaaaaatggcgt 1405
Query: 241 tagttgattgtatgatccatgctacagagaagaaataaaacagcaagaggcaaaatctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 tagttgattgtatgatccatgctacagagaagaaataaaacagcaagaggcaaaatctct 1465
Query: 301 acttctcagaaattggaaacttaagatatcattgtatagtagcggccacggaaatccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 acttctcagaaattggaaacttaagatatcattgtatagtagcggccacggaaatccatt 1525
Query: 361 ctgcttaaatcgttttcagaagtatgagcgttaatctatacaataaattagaaccggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 ctgcttaaatcgttttcagaagtatgagcgttaatctatacaataaattagaaccggaaa 1585
Query: 421 caggttataagttattacagctttcagatgatctgcttgatgcatttcaaacaggaccgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 caggttataagttattacagctttcagatgatctgcttgatgcatttcaaacaggaccgg 1645
Query: 481 taaaattcaaagcattatccgatgacgcaggaaacgttgttctgtgctctgaggacaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 taaaattcaaagcattatccgatgacgcaggaaacgttgttctgtgctctgaggacaaaa 1705
Query: 541 cctgggttataaagcaacgaaaccattccaacacggtgatcttaatgaatgamtttgctc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1706 cctgggttataaagcaacgaaaccattccaacacggtgatcttaatgaatgaatttgctc 1765
Query: 601 caactggaggtattccagaagacaaaatcaacacgtttggtcttccaaggcccggtgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 caactggaggtattccagaagacaaaatcaacacgtttggtcttccaaggcccggtgctg 1825
Query: 661 actgggctggatttagcacgcttgatagcgaattagaacctagacttgttgatggttcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 actgggctggatttagcacgcttgatagcgaattagaacctagacttgttgatggttcta 1885
Query: 721 tagatgtcacgcaattggatatataccatgggaaggacgttcccttaacgcgcaastgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1886 tagatgtcacgcaattggatatataccatgggaaggacgttcccttaacgcgcaagctta 1945
Query: 781 ctttacaaagagttcaaggatatgtgtccatgttcagagaaagagtttgtatcgaaatgg 840
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 ctttac-aagagttcaaggatatgtgtccatgttcagagaaagagtttgtatcgaaatgg 2004
Query: 841 ttcgaagtcggaggatcagtagttcaaggttttgcatgtwtactatctgaacgatwtatg 900
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 2005 ttcgaagtcggaggatcagtagttcaaggttttgcatgtttactatctgaacgatttatg 2064
Query: 901 ttgaaggcgttacacattatattgataagttgcatggcagaaa 943
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 ttgaaggcgttacacattatattgataagttgcatggcagaaa 2107
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6321
Number of Sequences: 1807
Number of extensions: 6321
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)